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Coral reef fish food webs

November 24, 2009 proopnarine 2 comments

Reef fish food web, Greater Antilles

Here are a couple of renderings of the vertebrate-only component of the coral reef food web. Reminder: the food web is what we expect to see for a reef in the Greater Antilles of the Caribbean, based on data collected around the mid-20th century. The vertebrate component comprises all fish and sea turtle species. The upper figure is the expected food web, and includes 196 species and 995 trophic interactions. Species are arranged on the periphery of the diagram, with interaction represented by the lines crossing the interior. The very busy, or hub species are higher trophic level predators, mostly carcharhinid sharks.

Jamaica coral reef fish food web

The lower figure is what we observe today in Jamaica. (Note: Jamaica is of particular interest for me as a starting comparison, both because of the excellent documentation of those reefs, and my Jamaican heritage; not picking on Jamaica). The number of species, out of 196, observed there over the past 10 years is dramatically smaller. Perhaps more obvious is the loss of interactions. I won’t present the actual data yet, since we will eventually prepare a paper to report all this, but the differences between the two food webs are obvious. We are currently rendering the complete food web, including primary producers and invertebrates, which will be an update of the figures presented in earlier posts. But there are a lot of species in there, and the computers have been churning now for about 17 hours!

Another view

February 5, 2009 proopnarine Leave a comment

sf_bay_metanetwork

This is another rendering of the San Francisco Bay food web (see below) using a different drawing algorithm. This view arranges guilds hierarchically instead of in a circular fashion. It is very interesting to note that “layers” roughly equivalent to trophic levels emerge naturally from the data. Primary producer guilds are at the bottom, and top predators at the top!

This figure was rendered by Rachel using AT&T’s Graphviz dot algorithm.

San Francisco Bay community food web

February 4, 2009 proopnarine 1 comment

SFBay_Metanetwork_circo_green

Now that’s complex! This is a rendering of the metanetwork for the San Francisco Bay food web. The network consists of 163 nodes, each node being a guild. In total, they represent ~1,600 species of invertebrates and fish, as well as four nodes representing various types of autotrophic producers. There are 5,024 links or trophic interactions between the guilds. The dataset currently excludes birds and marine mammals. Those data are being incorporated even as I type! So, when faced with this level of complexity, how does one determine if the system is resilient, or vulnerable to the removal or addition of specific types of species, or can withstand the effects of climate change?

The figure was produced by one of my graduate students, Rachel Hertog, who has done a tremendous amount of work on this project, as well as the Dominican Republican paleocommunities. The data come almost entirely from the collections of the California Academy of Sciences, notably the Dept. of Invertebrate Zoology & Geology, and the Dept. of Ichthyology.